Life Sciences Mass Spectrometry eNewsletter
Critical Mass Issue 11
May 2005
   Visit: thermo.com 
 Tip of the month: How to clean the Ion Transfer Tube  
Submerse the Ion Transfer tube in a solution of 1% by volume nitric acid in water (HPLC grade) and sonicate for 5 minutes. Remove the Ion Transfer tube and thoroughly rinse with water. Sonicate the Ion Transfer tube in HPLC grade methanol for 15 minutes, remove and dry with a stream of nitrogen.
 

 Proteomics Application: Top Down Analysis of Yeast Proteins  
Protein identification via mass spectrometry (MS) currently relies on two general strategies, namely, the bottom-up and top-down approaches. With the top-down approach, the intact proteins, individually or in mixtures, are mass analyzed and then fragmented inside the mass spectrometer without prior enzymatic digestion. The advantages of this method in comparison to the bottom-up approach are the ability to measure the intact protein molecular weight, thus preserving both the protein sequence and the integrity of post-translational modifications. Currently, the top-down approach has been almost exclusively restricted to FTICR instruments due to the need for high resolving power and mass accuracy.
Download Full Article (PDF 399kb) 

 Quantum Waves: Identification of Phase-I Metabolites  
The identification of biotransformation products of a drug is important in understanding its pharmacological and potentially toxicological effects. In order to improve the efficacy of a drug and minimize any toxic side effects, drug candidates are being screened earlier in the discovery process. By identifying metabolites of a drug candidate, the compound may be modified to block metabolically active sites increasing its duration of action, or the structure can be altered to prevent the formation of toxic by-products. One of the common means of identifying drug metabolites by LC/MS/MS is employing the selective scan modes of a triple quadruple mass spectrometer, namely the parent ion scan...
Download Full Article (PDF 253kb) 

 ASMS 2005 Events from Thermo  
Thermo has several events planned for ASMS 2005, including:
User Meeting: This application-focused event will take place Sunday morning June 5th beginning from 7:30PM to 12:00PM.
Annual Customer Event: This event will take place immediately after the morning User Meeting.
Lunchtime Sessions: These sessions will take place Monday through Wednesday June 6th-8th from 12:30PM to 1:20PM
Hospitality Suite: The suite will be open Monday through Wednesday June 6th - 8th from 6:30PM - 9:30PM.
More Information 

 Breakthrough Technology at ASMS  
Learn more about Thermo's new breakthrough accurate mass solution for small molecule analysis: Dr. Stevan Horning will be talking about Thermo's Revolutionary New High-Resolution Small Molecule Solution at the Users' Meeting on Sunday, June 5th in the Rio Grande Ballroom.
The presentation will focus on: Metabolite identification using accurate mass and MSn high-resolution, accurate mass component ID in complex matrices with routine high-resolution, high-throughput accurate mass operation and more.
Mark your calendar now!!
 

 Quantum Waves at ASMS  
Realize up to eight times improvement in sensitivity for your H-SRM assays. Visit our hospitality suite & find out what's new on the Finnigan TSQ Quantum Ultra.
 

 Small Molecule Application: Rapid Quantitative Screening of Drugs  
Drugs of abuse in the horse racing industry encompass a variety of chemical classes and are typically analyzed from a complex urine matrix. These factors render the rapid and effective diagnostic screening of these drugs at low levels difficult. This article discusses developing a simple and fast, yet rugged LC/MS based method capable of simultaneous qualitative and quantitative analysis. The authors of this article have evaluated the application of the Finnigan LTQ linear ion trap mass spectrometer for providing low levels of...
Download Full Article (PDF 420kb) 

 Software: Xcalibur 2.0 and XReport 1.0- Easy, Stable, Compliant, Versatile  
Version 2.0 of Xcalibur continues the tradition of a very versatile, easy-to-use data system - now enabling 21 CFR part 11 compliance. Whether you are an experienced Xcalibur user or new to our software, Xcalibur's homepage offers easy navigation through the process of instrument setup, sequence setup, and data acquisition. The review of results is easy in one of three browser environments; Qual Browser, Quan Browser, Library Browser. Reporting has gotten easier with the all-new XReport.
Read more on XReport 

 Trap Talk: Determining Metabolic Stability  
A high throughput strategy is essential in accelerating the lead optimization phase in the drug development cycle. The strategy discussed here involves the simultaneous determination of the nature and extent of metabolism by performing metabolite identification and metabolic stability measurements in a single analytical run. Using the Finnigan LTQ, the increased throughput gains are achieved without sacrificing data quality. The combination of ultra-fast cycle time and high spectral quality on the LTQ are key to achieving a balance between speed and spectral quality.
Read Full Article 

 Explore
- All Thermo Products
- All Markets Served
- Mass Spectrometry
 Additional Information  
For back issues of Critical Mass, visit thermo.com/criticalmass
 

© 2005 Thermo Electron Corporation
| Privacy Statement | Terms and Conditions | Unsubscribe | Send this to a colleague |

Corporate Headquarters: 81 Wyman Street Waltham, MA 02454-9046, USA