Life Sciences Mass Spectrometry eNewsletter
Critical Mass Issue 14
Aug 2005
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 Tip of the Month: BioWorks 3.2  
Keep your protein databases in order and up to date. Protein sequences are constantly added to databases and other sequences are corrected. Maintaining and updating your databases will improve the accuracy and validity of your database search results. Bioworks 3.2 facilitates database management with our FASTA Database tools including utilities to download databases, index databases create new databases, edit databases and create reversed databases. Furthermore, you can now easily see exactly which database was used to generate a search result, when the database was created, and how many entries were in the database by looking at the Database Information log file.
 

 Quantum Waves: Heated Electrospray Ionization (H-ESI) Probe  
The Ion Max compatible H-ESI probe from Thermo Electron enhances LC-MS/MS assay sensitivity up to eight times. "Dual Desolvation Zone" technology provides significant advantages for demanding DMPK applications by optimizing the extent of desolvation. The H-ESI probe is the most versatile LC-MS/MS ion source technology available on the market today and now comes standard on the Finnigan TSQ Quantum Ultra.
Watch the video to learn more 

 Contribute to Critical Mass  
Critical Mass is now accepting contributions from subscribers. If selected for publication, contributors will receive a Thermo-branded momento as a token of our appreciation. You are welcome to send contributions in all areas of Mass Spectrometry. Critical Mass will accept a range of contributions including but not limited to Your Research Interests in Mass Spectrometry or using Mass Spectrometry, Tips, New Applications, Interesting Stories on using Thermo's Mass Spectrometers, etc. Please click on the link provided below to read the Terms and Conditions for making contributions.
Read Terms and Conditions for Making Contributions 

 Thermo at HUPO 2005  
Thermo's Proteomicsworkshop at HUPO 2005 will cover solutions for protein quantitation, high-throughput protein identification, PTM characterization, top-down analysis, and biomarker discovery. A high-level summary will be followed by detailed presentations describing the use of Thermo mass spectrometers by two important contributors to the Human Proteome Project, namely, Professors Chris Turck and Matthias Mann, both from the Max Planck Institute.
Register Now 

 Applications Seminars in NJ & MA  
Thermo is pleased to announce its Applications Focused Seminar Tours including talks in both Small Molecule and Large Molecule Analysis. Topics include Top-Down Proteomics, Metabolism Studies, Ion Trap Technology, Bioanalytical Quantitation, etc. Please click on the appropriate links to view the Agenda and Reserve your place for these seminars:

- View Agenda for September 13 2005, Somerset, New Jersy

- View Agenda for September 27 2005, Cambridge, Massachusetts
 

 Thermo Acquires Ionalytics Corporation  
Ionalytics Corporation is a developer of a dynamic ion filtering device used with mass spectrometers in bioanalysis, proteomics and drug discovery. The company has developed a novel ion separation tool based on patent-protected FAIMS (High-Field Asymmetric Waveform Ion Mobility Spectrometry) technology. FAIMS will contribute tremendously to a customer's ability to push their detection limits, which is critical to accelerate drug discovery research.
Read the Press Release 

 Do Biologists Really Need Mass Spectrometry?  
Life science research has harnessed the power of mass spectrometry to gain a fundamental understanding of biology. With the continuous, rapid development of ionization methods and detector technologies over the past 30 years, mass spectrometry has proved its value and migrated inexorably from dedicated core facilities into biology labs and to the forefront of contemporary biology research.
Read Full Article 

 Software: Mass Frontier 4.0  
Mass Frontier 4.0 provides you with the tools required to transform mass spectral data into results - fast! The new Mass Frontier excels at predictive fragmentation and data management. Mass Frontier provides a mechanistic understanding of fragmentation schemes using proprietary mass spectral interpretation algorithms. In addition, relationships within datasets can be explored using various types of classification such as PCA, neural networks and fuzzy clustering.
More Information 

 Trap Talk: Data Dependent Constant Neutral Loss Scans  
In vitro biotransformation studies are commonly performed in the early drug discovery stage to determine the metabolic pathways and to generate Phase I and Phase II metabolites for their further characterization, both of which typically show a characteristic mass shift with respect to the molecular ion of the parent compound. The wide variety of potential metabolites and resulting complex mixtures make their identification a challenging and labor-intensive task.
Read Full Article (PDF 127 kB) 

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