Life Sciences Mass Spectrometry eNewsletter
Critical Mass Issue 25
Jul 2006
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 Thermo at IMSC 2006 Booth 6, 2nd Floor, Prague Congress Center  
Thermo is pleased to present its full range of state-of-the-art instrument systems, advanced software, and innovative column technology at IMSC 2006. Featured products cover applications in Proteomics, Quantitation and Metabolism. Learn more from our experts about the latest cutting edge developments in instrumentation - ion trap, quadrupole, hybrid, magnetic sector mass spectrometers, and hyphenated multi-instrument combinations of products. The user meeting will feature several talks covering biomarkers, proteomics, metabolomics, FAIMS, environmental and food safety analysis and more. The workshops feature metabolite identification with the help of spectral trees, quantitation with FAIMS and ETD in proteomics.
Learn More and Register Now 

 Tip of the Month: LTQ 2.0 and INTAMS  
Xcalibur 2.0/LTQ 2.0 now offers support for Independent Time-Bound Non-Data Dependent MS/MS Precursor Mass Windows (INTAMS). MS/MS precursor masses can be defined independent of method segments and referenced from a single scan event definition in the instrument setup page. Each mass entry has its own start and end time. Separate MS/MS precursor tables can be defined for positive and negative polarity modes. Up to 20,000 MS/MS precursor masses can be assigned to each polarity table.
See How 

 Essential Lipidomics using the LTQ Orbitrap  
Lipids are exceptionally diverse in their structural, chemical, and physical properties. A large number of lipids of various classes are present in cell membranes. That said, the compositional differences between various membranes, membrane compartments, and microdomains are quantitative, rather than qualitative. The LTQ Orbitrap coupled to automated nanoflow chip-based electrospray ionization source, is a versatile tool applicable to lipid analysis. This article covers 3 important areas of study in lipidomics, namely, quantitation of isomeric phosphatidylcholines, resolving isobaric species and compositional assignment and fragmentation pathways.
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 Analysis of Labile Gangliosides using vMALDI  
Gangliosides are molecules found on the plasma membranes of many types of cells in the body, with particular abundance in the central nervous system. They play important biological roles such as toxin receptors and with cell-to-cell recognition in adhesion. Their growth is also up-regulated in cancerous cells and therefore could be targeted as important molecules for cancer research. The composition of gangliosides is dependent on species as well as cell type and can also change according to disease or developmental states and therefore may be regarded as biomarkers. Current techniques to elucidate these differences include thin layer chromatography as well as immunochemical and immunohistochemical methods. Mass spectrometry approaches enable “high quality...
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 Request your ASMS Posters and Presentations CD  
This information packed CD contains Thermo's posters and presentations from ASMS 2006 covering topics involving metabolism, quantitation and proteomics. Learn more about the latest techniques in mass spectrometry and chromatography including FAIMS, ETD and new application-specific software.
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 Ultra High Pressure Liquid Chromatography  
The aim of a chromatographic separation is to obtain good resolution in a short analysis time, i.e., resolution needs to be maximized while minimizing analysis time. Sub 2 µm particles have been developed as a chromatographic media to achieve high resolution of the sample components, fast analyses and high sensitivity. Resolution (Rs) is proportional to the square root of separation efficiency (N), as described by...
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 Trap Talk: Pulsed Q Collision Induced Dissociation (PQD)  
Among a variety of approaches for precursor ion activation and dissociation in ion trap mass spectrometers, resonance excitation collision induced dissociation (CID) has been the most widely used. Recently, a new dissociation technique called Pulsed Q Collision Induced Dissociation (PQD), has been developed by Thermo Electron and implemented exclusively for their linear ion trap mass spectrometers. The patented technique of PQD generates spectra...
Download Full Article [PDF 88 kB] 

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